Unofficial, community plugin, not affiliated with RCSB PDB, Rutgers, or UCSF.
Helps your AI build, check, validate, and deposit integrative structures (IHMCIF) for PDB-IHM using python-ihm, IHMValidation, and the ihmv/ihmdep CLIs.
Skills 5 in the Claude listing
build Build a depositable integrative-structure IHMCIF (mmCIF) file with python-ihm from a model's coordinates and the data used to compute it (crosslinks, EM maps, SAS profiles, database accessions, starti check Local pre-check of an integrative-structure file (IHMCIF .cif, .cif.gz, or .bcif) before PDB-IHM validation or deposition. deposit Deposit an integrative structure to PDB-IHM and manage the deposition with the ihmdep CLI. ihmcif Reference for integrative-structure files in IHMCIF (the IHM extension of PDBx/mmCIF, text or BinaryCIF) and the python-ihm and gemmi APIs used on them. validate Get or interpret an IHMValidation report for an integrative structure.